Transposon insertional mutagenesis in Saccharomyces uvarum reveals trans-acting effects influencing species-dependent essential genes

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 2.
Figure 2.

Insertion ratio distributions of S. uvarum intergenic regions and known S. cerevisiae essential and nonessential genes. (A) Density plots displaying the distribution of insertion ratios across three feature types: S. uvarum intergenic regions between Watson-and-Crick–oriented genes ranging from 7 kb–500 bp (gray) and S. uvarum genes whose orthologs are known S. cerevisiae essential (Sc_E in blue) and nonessential genes (Sc_NE in red). The dashed line represents an insertion ratio of 0.25 and defines the cut-off value to classify essential and nonessential genes. (B) Box plots of insertion ratios by feature type described in plot A. Significant insertion ratio differences exist between known S. cerevisiae essential and nonessential genes and between S. uvarum intergenic regions. (Wilcoxon tests Sc_E:Su_Intergenic P < 2.2 × 10−16, Sc_E:Sc_NE P < 2.2 × 10−16, Sc_NE:Su_Intergenic P = 7.08 × 10−6).

This Article

  1. Genome Res. 29: 396-406

Preprint Server