FIND: difFerential chromatin INteractions Detection using a spatial Poisson process

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Figure 4.
Figure 4.

Performance comparison between FIND and edgeR with genomic characteristics. (A) The numbers of DCIs detected by FIND and edgeR. (B) The distribution of the span of the DCIs reported by edgeR and FIND. We observed that the majority of FIND's results have a span <1 Mb. (C) The proportion of the genome-wide DCIs located inside TADs for both edgeR and FIND. (D) The distances of edgeR- and FIND-reported DCIs to the CTCF differential peaks.

This Article

  1. Published in Advance February 12, 2018, doi: 10.1101/gr.212241.116 Genome Res. 28: 412-422

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