Metagenomic analysis with strain-level resolution reveals fine-scale variation in the human pregnancy microbiome

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Figure 3.
Figure 3.

Gestational age trends for abundances of gene families in saliva samples for each subject. Gestational age was used to constrain the redundancy analysis of variance-stabilized gene family abundances within individuals. Gestational age effect is observed along the x-axis (RDA1 axis), and points within plots were connected based on the resulting ordination scores. P-values were calculated with ANOVA on the RDA ordination constraint using the anova.cca function of the vegan package in R.

This Article

  1. Published in Advance September 19, 2018, doi: 10.1101/gr.236000.118 Genome Res. 28: 1467-1480

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