Systematic longitudinal survey of invasive Escherichia coli in England demonstrates a stable population structure only transiently disturbed by the emergence of ST131

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Figure 4.
Figure 4.

Multidrug-resistance plasmids present in ST131. Phylogeny of the whole collection with columns to the right representing phylogroup, the five most frequent STs, phenotypic antibiotic-resistance data linked to the plasmid (ceftazidime, ciprofloxacin, cefotaxime, cefuroxime- and gentamicin), the presence of incFIA and incFIB, and antibiotic-resistance genes carried by the plasmid (aac(6′)-Ib, blaCTX-M, blaOXA, dfrA, mphA, sul1, and tetA). (Black) Missing; (color) present. The phylogenetic tree is the same as in Figure 1.

This Article

  1. Published in Advance July 18, 2017, doi: 10.1101/gr.216606.116 Genome Res. 27: 1437-1449

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