Figure 2.
sh4 haplotypes in wild and domesticated rice populations. (A) Local ancestry inference at sh4 locus for K = 5. The bar at the bottom denotes O. sativa (green) and O. rufipogon (black) accessions, respectively. (B) Diversity reduction at the selective sweep region of sh4. The y-axis shows the ratio of pairwise differences estimator (π) of nucleotide diversity among populations. (C) dXY values between populations at the selective sweep region of sh4. The gray line indicates the sh4 gene region in B and C.
