Figure 6.
Pipeline for constructing scaffolds and the final sequence. Shown is an overview of the protocol for selecting reads as linkers, determining contig joins to make scaffolds, and ordering and making the final sequence. Yellow boxes denote data, red boxes denote existing computer programs that were used (these are named at the left), and blue boxes denote in-house scripts. Gray hexagons are used to show data that are not used further in the pipeline.
