Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 5.
Figure 5.

Structural genome features and population genetic summary statistics surrounding a peak of extreme genetic differentiation between hooded and carrion crows on Chromosome 18. Comparison of population genetic summary statistics ρ/bp, θW, and FST in 50-kb windows: (horizontal green bars) SR assembly with crowSat1 locations in dark red; (horizontal blue bars) OM contigs with RAMs schematically shown with densely spaced nickase motifs; (vertical gray bars) SR scaffold ends.

This Article

  1. Published in Advance March 30, 2017, doi: 10.1101/gr.215095.116 Genome Res. 27: 697-708

Preprint Server



Current Issue

  1. March 2026, 36 (3)
  1. Current Issue
  1. Alert me to new issues of Genome Research