Combination of short-read, long-read, and optical mapping assemblies reveals large-scale tandem repeat arrays with population genetic implications

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Figure 1.
Figure 1.

Assembly comparisons. Schematic colored and numbered boxes with arrows correspond to arbitrarily sized homologous regions aligned between the different sequence assemblies based on short reads (SR), long reads (LR), and hybrid scaffolding via optical mapping (SR + OM and LR + OM). Note that boxes 1 and 7 are not present on the SR scaffolds, because they align to another scaffold not shown.

This Article

  1. Published in Advance March 30, 2017, doi: 10.1101/gr.215095.116 Genome Res. 27: 697-708

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