Genes that are remodeled during WT development but mismodeled in chdC nulls. (A) Venn diagram compares the gene sets mismodeled during growth and development of chdC-null cells to the gene set that is remodeled during WT development. (B) Normalized read midpoint frequencies of genes classified as both remodeled and mismodeled were determined for WT cells at growth stage (black) or the loose-mound stage (red) aligned to the midpoint of the first defined nucleosome in growing WT cells. (C) Normalized read midpoint frequencies of genes classified as both remodeled and mismodeled were determined for loose-mound stage of WT (red) or chdC-null mutant (blue) cells aligned to the midpoint of the first defined nucleosome in growing WT cells. Black arrows indicate positions of nucleosomes of WT cells during growth relative to the first nucleosome.
