Altered hydroxymethylation is seen at regulatory regions in pancreatic cancer and regulates oncogenic pathways

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Figure 3.
Figure 3.

Chromatin accessibility patterns from ATAC-seq in pancreatic cancer define regulatory regions of the genome. (AC) ATAC-seq peaks in Pa04C pancreatic cancer cells are enriched in promoter regions (A), known enhancers (B), and known DNase hypersentivity regions (C). (D) Correlation of ATAC-seq peaks with RNA-seq shows proximity to highly expressed transcripts. (E) Example of highly expressed MYC oncogene that shows larger ATAC-seq peaks in pancreatic cancer cells when compared to controls.

This Article

  1. Genome Res. 27: 1830-1842

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