Building a genomic framework for prospective MRSA surveillance in the United Kingdom and the Republic of Ireland

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Figure 5.
Figure 5.

Phylogeny of CC5. The maximum likelihood tree was based on core SNPs identified by mapping to the reference ST5 genome N315. The total number of SNP sites present in the core genome alignment in this lineage was 3229 SNP sites. Welsh isolates have light green branches, and the branch leading to reference N315 is colored red.

This Article

  1. Published in Advance December 15, 2015, doi: 10.1101/gr.196709.115 Genome Res. 26: 263-270

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