Genome-wide identification and characterization of transcription start sites and promoters in the tunicate Ciona intestinalis

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Figure 4.
Figure 4.

CpG content and expression specificity. The CpG content was calculated in each core promoter sequence (−100 to +99) in each promoter class. The CpG content was defined as the number of CpG sites divided by (N − 1), where N is the length of the core promoter sequence (200 bp). The expression specificity was evaluated by relative entropy (see Supplemental Methods).

This Article

  1. Published in Advance December 14, 2015, doi: 10.1101/gr.184648.114 Genome Res. 26: 140-150

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