Using populations of human and microbial genomes for organism detection in metagenomes

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 4.
Figure 4.

Fraction of shared genus (left) and species (right) calls. ROC curve shown using different minimum abundance thresholds to make organism calls. Different taxonomy calling methods are shown. HMP DACC, MetaPhlAn, and LMAT taxonomy calls with different database types: LMAT-RefSeq (RefSeq), LMAT-ML (ML), and LMAT-ML-Human (ML+humanNoprune).

This Article

  1. Published in Advance April 29, 2015, doi: 10.1101/gr.184879.114 Genome Res. 25: 1056-1067

Preprint Server



Current Issue

  1. March 2026, 36 (3)
  1. Current Issue
  1. Alert me to new issues of Genome Research