Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cells

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Figure 5.
Figure 5.

ceRNAts of lnceRNAs are functionally related. (A) Distribution of the mean linkage in an integrative functional network (Honti et al. 2014), for ceRNAts (median of mean linkage = 0.534, red) and miRNA-independent targets (median of mean linkage = 0.205, dark gray) of lnceRNAs. (B) Distribution of mean linkage weights for 1000 sets of randomly selected mESC-expressed genes. The red arrow indicates the mean linkage weight for ceRNAts of linc1316. The inset illustrates the connectivity of functional similarities (red edges) within miRNA-dependent target genes (red nodes). (C) Table illustrating Biological Processes Gene Ontology (GO) annotations that are significantly enriched within ceRNAts of linc1316 relative to a background of mESC-expressed genes. (*) P < 0.05.

This Article

  1. Genome Res. 25: 655-666

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