A systems-level approach to parental genomic imprinting: the imprinted gene network includes extracellular matrix genes and regulates cell cycle exit and differentiation

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 5.
Figure 5.

Modulation of imprinted gene expression alters cell cycle exit and adipogenic differentiation of 3T3-L1 preadipocytes. (A) Effect of IG overexpression on cell numbers during exponential growth. Exponentially growing 3T3-L1 cells were cotransfected with eGFP and CAT (chloramphenicol acetyl transferase) as a negative control, Trp53 as a positive control of cell growth inhibition, or cDNAs encoding the indicated IGs. Following plating at low density, GFP-positive cells were counted 48 h post-transfection (n = 8): 84.8 ± 6.4% CAT-transfected cells were GFP positive. (B) Effect of IG down-regulation on DNA synthesis during exponential growth. Exponentially growing 3T3-L1 cells were transfected with siRNAs targeting the indicated IGs and plated at low density. DNA synthesis was monitored by measuring BrdU incorporation 24 h post-transfection (n = 20) and compared to the appropriate control condition, which displayed 31.9 ± 4.0% BrdU-positive cells. (C) Effect of IG overexpression on cell numbers during clonal expansion. 3T3-L1 cells were cotransfected as in A and plated at confluence. Three days post-transfection, cells were incubated with IDX to trigger adipogenic differentiation. GFP-positive cells were counted 8 d after IDX addition (n = 14): 26.2 ± 5.2% CAT-transfected cells were GFP positive. (D) Effect of IG down-regulation on DNA synthesis when cells reach confluence. 3T3-L1 cells were transfected as in B and plated at mid-confluence. DNA synthesis was monitored as in B (n = 20 for Ndn and Sgce; n = 30 for all other IGs): 11.5 ± 2.4% of control cells were BrdU positive. (E) Effect of Pon2 and Slc38a4 overexpression on adipogenic differentiation of 3T3-L1 preadipocytes. Cells were transfected as in A and plated at confluence. Eight days after IDX addition, cell size (forward light scattering [FSC]) and granularity (side light scattering [SSC]) of GFP-positive cells were measured by flow cytometry. SSC allows visualizing accumulation of lipid vesicles in differentiated adipocytes (red dots). (F) Effect of IG down-regulation on adipogenic differentiation of 3T3-L1 preadipocytes. Representative Oil Red O (ORO, a lipid stain) staining of 3T3-L1 cells that were left untransfected (Ctrl.) or transfected with scramble siRNA (Scr.1) or with siRNAs targeting the indicated genes, plated in duplicate at confluence, incubated with IDX 3 d post-transfection, and fixed 12 d later (n = 20 for Ndn and Sgce; n = 30 for all other IGs). (G) Effect of IG overexpression on adipogenic differentiation of 3T3-L1 preadipocytes. Cells were transfected and treated as in A. Quantification of SSC-, GFP-positive cells after transfection and induction of differentiation, compared to the CAT negative control at day 8 of differentiation (n = 16). (H) Effect of IG down-regulation on adipogenic differentiation of 3T3-L1 preadipocytes. Cells treated as in B were stained with ORO, which was quantified as described in Methods (n = 30). Cdkn1b and Wnt6 are positive controls negatively and positively affecting the adipogenic differentiation process, respectively. Data are mean ± SEM of the indicated number of replicate measures from at least three independent experiments. Statistical significance was assessed using a nonparametric, pairwise Wilcoxon test. (*) P < 0.05; (**) P < 0.01; (***) P < 0.001.

This Article

  1. Genome Res. 25: 353-367

Preprint Server