Oxford Nanopore sequencing, hybrid error correction, and de novo assembly of a eukaryotic genome

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 1.
Figure 1.

(A) Oxford Nanopore read lengths and accuracy. Scatter plot of read length versus accuracy with marginal histograms summarizing the raw ONT alignments. (B) Heatmap of Oxford Nanopore read lengths and accuracy. Each cell represents a summary of how reads of different lengths align. Each color represents the fraction of reads in a given read-length bin. Maximal alignment efficiency is observed between 10 and ∼40 kb, while fragments longer than 80 kb are virtually unalignable.

This Article

  1. Published in Advance October 7, 2015, doi: 10.1101/gr.191395.115 Genome Res. 25: 1750-1756

Preprint Server



Current Issue

  1. January 2026, 36 (1)
  1. Current Issue
  1. Alert me to new issues of Genome Research