Quantifying ChIP-seq data: a spiking method providing an internal reference for sample-to-sample normalization

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 2.
Figure 2.

Schematic diagram summarizing the SAP. The main steps, i.e., examination of sample quality, scaling to total amount of genome-aligned tags, selection of signal genes, score calculation, and spike adjustment, are numbered.

This Article

  1. Genome Res. 24: 1157-1168

Preprint Server