Multiplex mapping of chromatin accessibility and DNA methylation within targeted single molecules identifies epigenetic heterogeneity in neural stem cells and glioblastoma

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 3.
Figure 3.

Probing chromatin with M.CviPI neither alters bisulfite patch PCR performance nor detection of CG methylation. (A) Number of sequencing reads decreases as a function of amplicon size. (B) Linear regression and Pearson's correlation plotted for CG methylation levels in NSC treated with 0-unit versus 100-unit M.CviPI. DNA methylation and chromatin accessibility at the imprinted H19 locus for NSC treated with (C) 0 units or (D) 100 units of M.CviPI. Symbols and the key for methylation status at right of C are as defined in Figure 1.

This Article

  1. Genome Res. 24: 329-339

Preprint Server