VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 3.
Figure 3.

Recurrent chromosome-arm gains and losses in ovarian cancer. Eight significant gains and 22 significant losses of chromosome arms identified by TCGA in SNP array data for 489 cases were recapitulated using exome data for 142 cases. Observed frequencies were highly correlated between data sets for both gains (r2 = 0.84) and losses (r2 = 0.86).

This Article

  1. Published in Advance February 2, 2012, doi: 10.1101/gr.129684.111 Genome Res. 22: 568-576

Preprint Server



Current Issue

  1. March 2026, 36 (3)
  1. Current Issue
  1. Alert me to new issues of Genome Research