Integrative analysis of environmental sequences using MEGAN4

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Figure 7.
Figure 7.

Comparison of the taxonomic analysis of a 16S rRNA data set (Morris et al. 2010), computed using five different approaches: MEGAN4's BLASTN-based SILVA analysis, the RDP website's classifier (Cole et al. 2009), MG-RAST's RDP-based approach (Glass et al. 2010), the SILVA website's aligner (Pruesse et al. 2007), and MG-RAST's SILVA-based approach targeting the SSU gene. In this figure, the bar charts on higher-rank nodes reflect the total number of reads assigned to the corresponding node or to any of the nodes in the subtree below the node.

This Article

  1. Genome Res. 21: 1552-1560

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