The transcriptional diversity of 25 Drosophila cell lines

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 1.
Figure 1.

Clustering of cell lines by principal component analysis. (A) Clustering of cell lines with whole-animal developmental stages, showing components 1, 2, and 3. The whole-animal data were obtained using the same procedures as the cell line data (Graveley et al. 2011). (Red) Cell lines. (Dotted line) A trajectory for the developmental data. (Blue) Embryonic stages (Ex, where x is the time, in hours, at the end of a 2-h period measured from egg-laying); (green) larval stages (Lx where x is the instar number; 3A, 3B, 3C, and 3D represent sequential periods in the third larval instar); (pink) pupal stages (Px, where x is the time, in hours, after white prepupa); (brown) adult males (Mx, where x is the time, in days, after adult eclosion); (yellow) adult females (Fx, where x is the time, in days, after adult eclosion). (B) Clustering of 25 cell lines; components 1 and 2 are shown. Cell lines are color-coded to indicate the tissues from which they were derived; a key is shown below the graph.

This Article

  1. Genome Res. 21: 301-314

Preprint Server