Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegans

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Figure 7.
Figure 7.

Common and unique targets of LIN-39, MAB-5, and EGL-5. (A) Venn diagram overlap of gene targets for LIN-39, MAB-5, and EGL-5. (B) Example of common binding sites in the targets unc-62 and kin-1. (C) Example of unique target genes for each factor. Note that the lin-39 locus exhibits increased reads across the gene in the LIN-39 and input tracks because of the extra copies of the LIN-39:GFP transgene in the genome, and therefore does not necessarily represent binding. (D) Enriched consensus DNA motifs for each set of unique target genes, with e-value.

This Article

  1. Genome Res. 21: 245-254

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