Digital gene expression for non-model organisms

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 3.
Figure 3.

Application of EDGE to mouse tissues. (A) Using a Poisson log linear model, 327 and 945 genes were identified as differentially expressed between Mc1r+/+ and Mc1re/e in (A) neonate dermis (FDR < 5%) and (B) spleen (FDR < 0.1%), respectively. Average gene counts from wild-type (five libraries each for neonate dermis and spleen) and mutant (six for neonate dermis and five for spleen) EDGE libraries are plotted against each other on a log10 scale. Differentially expressed genes are plotted in red. (C) EDGE tags were detected for 17,535 unique mouse genes in at least one tissue, and 1589 genes were expressed in only a single tissue.

This Article

  1. Published in Advance August 15, 2011, doi: 10.1101/gr.122135.111 Genome Res. 21: 1905-1915

Preprint Server



Current Issue

  1. March 2026, 36 (3)
  1. Current Issue
  1. Alert me to new issues of Genome Research