Sensitive and accurate detection of copy number variants using read depth of coverage

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Table 2.

Comparison of nonoverlapping calls from RD-based and PEM based analysis of NA18507

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Table 2.
  • The EWT- and PEM-specific calls are compared in terms of size. In addition, we compared them in terms of the content of segmental duplications, LINE elements, SINE elements, and simple repeats. For each element that was tested, we list the total number of events that intersect with at least one element (i.e., “count”), and we list the total fraction of base pairs of the events that intersect with the element (i.e., “intersection”).

This Article

  1. Genome Res. 19: 1586-1592

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