SNP detection for massively parallel whole-genome resequencing

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Figure 4.
Figure 4.

Effective allele frequency of incorrect alleles before and after adjusting reads with identical mapping location. We calculated the frequency of the alleles in the Asian genome sequencing reads that are different from the genotyping results. The frequency contributed by the n-th reads with the same mapping location was multiplied by θn, where 0 ≤ θ ≤ 1. The original, adjusted frequency and Poisson distribution are shown.

This Article

  1. Genome Res. 19: 1124-1132

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