SNP detection for massively parallel whole-genome resequencing

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Figure 1.
Figure 1.

Algorithmic overview of consensus calling for massively parallel resequencing. The program takes raw sequencing reads as input, maps them onto the reference genome, and calculates the likelihood of each possible genotype. It outputs the inferred genotype with highest posterior probability and its corresponding quality score.

This Article

  1. Genome Res. 19: 1124-1132

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