A transcription factor affinity-based code for mammalian transcription initiation

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Figure 2.
Figure 2.

Regions of positional enrichment with respect to TSS for TF-binding elements TATA, OCT1, and YY1. TRANSFAC ID for each binding element is displayed in plot titles. Plots display cumulative score (summed over the annotation-supported training set TSS regions) for each element as a function of position with respect to TSS. Colors show the region subdivisions diagrammed in Figure 3A. (Red and gray) Flanking regions.

This Article

  1. Published in Advance January 13, 2009, doi: 10.1101/gr.085449.108 Genome Res. 19: 644-656

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