A SILAC-based DNA protein interaction screen that identifies candidate binding proteins to functional DNA elements

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Table 1.

Comparison of in-gel digestion versus in-solution digestion based SILAC analysis of proteins interacting specifically with the DNA column bearing a functional ESRRA (ERRalpha) site (as shown in Fig. 3)

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Table 1.

  • aNumber of identified unique peptides for specific binders.

  • bNumber of quantified peptides for specific binders.

This Article

  1. Published in Advance November 17, 2008, doi: 10.1101/gr.081711.108 Genome Res. 19: 284-293

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