Can the whole be less than the sum of its parts? Pathway analysis in genome-scale metabolic networks using elementary flux patterns

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Table 1.

List of subsystems of two genome-scale networks for which elementary flux patterns (EFPs) have been computed

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Table 1.

  • aThe function of the subsystem as annotated in the corresponding model.

  • bComputation time was measured on an Intel Core 2 Quad Q9300 machine with 4096 MB RAM running Linux Kernel 2.6.25 and Java Hotspot VM version 1.6.0. COIN-OR Cbc version 2.0 has been used to solve the mixed-integer linear programs.

This Article

  1. Published in Advance June 18, 2009, doi: 10.1101/gr.090639.108 Genome Res. 19: 1872-1883

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