Abundant and dynamically expressed miRNAs, piRNAs, and other small RNAs in the vertebrate Xenopus tropicalis

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Table 2.

Repeat association of piRNA clusters

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Table 2.

  • Repeat, name of repeat from GIRI data file; hits < 1 × 10−10, number of matches in up to 20 scaffolds; clusters, number of clusters matching a repeat; hits = number of distinct alignments within that group of clusters. DTN, DNA transposon nonautonomous; DTA, DNA transposon autonomous; LINE, long interspersed elements; and LTR, retrotransposon.

This Article

  1. Published in Advance July 23, 2009, doi: 10.1101/gr.093054.109 Genome Res. 19: 1766-1775

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