De novo search for non-coding RNA genes in the AT-rich genome of Dictyostelium discoideum: Performance of Markov-dependent genome feature scoring

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Figure 4.
Figure 4.

Analysis of two candidates with an upstream DUSE sequence. Northern blot analyses were performed for each candidate in sense and anti-sense (as) directions as indicated. RNA secondary structure predictions were obtained from RNAfold using the sequence length deduced from the Northern blot analyses and assuming a transcription start site located 63 nt downstream from the DUSE. (A) Northern blots and (B) secondary structure predictions for the drd38 and drd3 candidates.

This Article

  1. Genome Res. 18: 888-899

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