Sequencing of natural strains of Arabidopsis thaliana with short reads

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Table 3.

Comparison of SHORE and MAQ for SNP prediction with all Bur-0 reads

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Table 3.

Specificity and sensitivity calculated based on 2806 dideoxy sequenced Bur-0 SNPs in nonrepetitive regions (Nordborg et al. 2005). Parameters for SHORE and MAQ 0.6.8 predictions are given in Supplemental Tables S2 and S3.

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  1. Genome Res. 18: 2024-2033

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