Table 4.
Fraction of imputed homozygous genotypes inconsistent with ESP traces
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aAnalysis was limited to clones having a best concordant placement and positions having a sequence quality of Q30. Only SNPs with missing genotype data but an imputed homozygous state were considered.
bDiscrepant SNPs are those where the reported imputed genotype is homozygous but the ESP trace supports the alternative SNP allele.
