Haplotype sorting using human fosmid clone end-sequence pairs

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Figure 3.
Figure 3.

Phase-switching revealed by sequenced fosmid clones. HapMap SNP genotypes were mapped onto finished fosmid clones. Nine clones (as indicated) show patterns of inconsistent SNP phase assignments. The blue arrows correspond to SNPs assigned to haplotype A, and red arrows correspond to haplotype B. Since each clone represents a single chromosomal fragment, each sequence corresponds to a single haplotype.

This Article

  1. Published in Advance October 3, 2008, doi: 10.1101/gr.081786.108 Genome Res. 18: 2016-2023

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