Finding friends and enemies in an enemies-only network: A graph diffusion kernel for predicting novel genetic interactions and co-complex membership from yeast genetic interactions

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 2.
Figure 2.

Diffusion of a hypothetical fluid on a graph. (A) Diffusion with source and sink. Fluid is pumped from the source into a selected set of query nodes and is allowed to leak out from each node into a sink at first-order rate γ. For clarity, an undirected network is shown. (B) Diffusion between two nodes in a directed network. Fluid diffuses in both directions according to the two edge weights between nodes i and j. A directed network is shown for generality.

This Article

  1. Published in Advance October 2, 2008, doi: 10.1101/gr.077693.108 Genome Res. 18: 1991-2004

Preprint Server



Current Issue

  1. January 2026, 36 (1)
  1. Current Issue
  1. Alert me to new issues of Genome Research