Calling cards for DNA-binding proteins

Click on image to view larger version.

Table 1.

Top 20 targets of Gal4 and Gcn4

Click on table to view larger version.

Table 1.

aKnown Gal4 targets as defined from three resources: TRANSFAC, SCPD, and Ren et al. 2000.

bBinding of Gal4 and Gcn4 to these genes as revealed by data of ChIP-chip experiments (P < 0.001) (Harbison et al. 2004).

cCGGN11CCG.

dKnown Gcn4 targets are as defined by Pokholok et al. 2005.

eTGACTC.

fThe consensus Gcn4 binding site is based on the weight matrix from TRANSFAC; a “weak” site is TGANTN.

This Article

  1. Genome Res. 17: 1202-1209

Preprint Server