A comprehensive computational characterization of conserved mammalian intronic sequences reveals conserved motifs associated with constitutive and alternative splicing

Click on image to view larger version.

Table 1.

Summary of the numbers of significantly enriched n-mers found in the DI and AI and of the GCCS clustering performance

Click on table to view larger version.

Table 1.

For comparison, the numbers for the pseudo-DI and pseudo-AI samples are also shown. Row 2 is the number of n-mers with probabilities that exceeded the high end of the confidence interval (see Supplemental Materials and Methods). Rows 3 and 4 contain the numbers and corresponding percentage of n-mers that clustered. Row 5 contains the final number of clusters that were produced after application of the GCCS method.

This Article

  1. Genome Res. 17: 1023-1033

Preprint Server