A comprehensive computational characterization of conserved mammalian intronic sequences reveals conserved motifs associated with constitutive and alternative splicing

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Figure 5.
Figure 5.

Samples of GCCS clusters derived from the donor intronic (DI) region. Shown are the graph clusters representing the clustered n-mers used to construct the CSMs for the putative Fox and QKI protein binding sites (Fig. 7, DI-1 and DI-2, respectively). Vertices are colored according to their conservation Z-score (see color key). The graphs were drawn using GraphViz (http://www.graphviz.org/).

This Article

  1. Genome Res. 17: 1023-1033

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