PolyScan: An automatic indel and SNP detection approach to the analysis of human resequencing data

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Figure 3.
Figure 3.

Overview of PolyScan v2.0 calculation sequence. PolyScan takes as input a set of chromatogram files, phd files created by base callers such as phred, a Consed ace file containing first-pass assembly information, and a set of candidate SNP positions predicted by other software or extracted from public domain data. It outputs a set of putative heterozygous indels and SNPs.

This Article

  1. Published in Advance April 6, 2007, doi: 10.1101/gr.6151507 Genome Res. 17: 659-666

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