Assessment of the performance of CI using annotated exons and intron sequences between 90–300 bp
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aExon and intron sequences are defined based on full-length cDNA sequences (see Methods). For each exon, the ORF in the correct frame is evaluated. For each intron, it is regarded as having a CI value above the threshold if the longest ORF in an intron has a qualifying CI.
bThresholds were defined according to sequence sizes with a false-positive rate of 1% (Supplement A).











