Comparison of predicted interactions with high-throughput experimental data
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Two high-throughput experimental data sets that are available in the literature, namely, that derived from His-tagged bait analysis (Arifuzzaman et al. 2006) and that from TAP-tagged bait analysis (Butland et al. 2005). The interactions reported in these data sets and those in the EcoCyc database (Keseler et al. 2005) were compared with our predictions. The values quoted in the table are the interactions that are common to the two methods. The values in parentheses correspond to the indirect interactions, that is, those mediated by neighbors, in the predicted network.
