Evolutionary rate analyses of orthologs and paralogs from 12 Drosophila genomes

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Table 1.

Gene prediction for 11 Drosophila species' genomes

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Table 1.

Analysis is based on 19,369 D. melanogaster transcripts from 13,836 D. melanogaster genes. Only genes with conserved gene structure are considered, where predicted genes with conserved gene structure contain at least two exons with conserved exon boundaries or are single-exon predictions stemming from single-exon templates. Pseudogenes are predictions with disruptions that contain at least one in-frame stop codon or frameshift.

aTranscripts/gene in D. melanogaster with matches in target genome.

bBetween template and best prediction in percent.

cApproximately threefold whole genome shotgun (WGS) of w501 strain, onefold coverage of six other strains.

This Article

  1. Genome Res. 17: 1837-1849

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