Information capture using SNPs from HapMap and whole-genome chips differs in a sample of inflammatory and cardiovascular gene-centric regions from genome-wide estimates

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Table 3.

Underestimation of information capture in ENCODE data due to short sequence lengths

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Table 3.

(m̅) Mean maximum r2; (CR) capture rate; (nCR) noncapture rate; (A100) Affymetrix GeneChip 100k; (A500) Affymetrix Gene Chip 500k; (HH300) Illumina HumanHap300; (HH550) Illumina HumanHap550.

This Article

  1. Published in Advance September 25, 2007, doi: 10.1101/gr.5996407 Genome Res. 17: 1596-1602

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