Identity of highest-scoring pairs for 192 sequence tags from clones selected from the Tb427-chrIb-enriched plasmid library, derived by BLASTN comparison of sequence tags with Tb927 sequence in GeneDB and trypanosome sequence in the EMBL database. (A) VSGs, (B) VSG expression site-associated genes, (88% of these sequences are variants of ESAG3, most copies of which are associated with non-expressed VSG gene arrays in the Tb927 genome sequence [Berriman et al. 2005]). (C) intergenic sequences in VSG arrays in Tb927, (D) RHS genes and retrotransposons, (E) genes from other chromosomes, (F) UDP-dependent glycosyl transferase, (G) failed sequences, (H) chrI genes (chromosome core), (I) intergenic sequences (chromosome core), (J) telomeric and telomere-associated sequences, (K) no significant match, (L) UDP-gal-phosphoglycan transferase. (The genes in F and L are associated with VSG gene arrays in Tb927 [Berriman et al. 2005]. See Supplemental Table S2 for additional details.)
