A molecular-properties-based approach to understanding PDZ domain proteins and PDZ ligands

(Downloading may take up to 30 seconds. If the slide opens in your browser, select File -> Save As to save it.)

Click on image to view larger version.

Figure 6.
Figure 6.

Experimentally verified novel PDZ complexes. (A) DLG1 binds the break point cluster region (BCR) protein. 293T cells were co-transfected with wild-type HA-tagged BCR or PDZ-binding motif mutant (mutBCR) and GFP-tagged DLG1. Anti-HA antibody immunoprecipitates were resolved by SDS-PAGE and immunoblotted for GFP-DLG1. (Upper panel) Proteins retained on Ha beads were probed with anti-GFP antibody; (middle panel) cell extracts probed with anti-Ha antibody; (lower panel) cell extracts probed with anti-GFP. (B) Co-immunoprecipitation demonstrating that DLG1 PDZ domains are sufficient for binding to BCR. Co-transfection of HA epitope-tagged BCR along with full-length wild-type GFP-DLG1 or the isolated DLG1 PDZ domains 1–3. (Upper panel) Proteins retained on anti-HA beads probed with anti-GFP antibody; (middle panel) cell extracts probed with anti-HA antibody; (bottom panel) cell extracts probed with anti-GFP antibody. (C) Staining of endogenous BCR-DLG1 shows their co-localization at the midbody in U20S cells during cytokinesis. (D) SH2D3C associates with CARD11. Interaction between GST-tagged SH2D3C with endogenous CARD11 in Jurkat cells. Expression constructs encoding GST vector and GST-SH2D3C were electroporated into Jurkat cells, and 24 h post-transfection lysates were prepared and subjected to GST pull-down. The immunoprecipitates (IP) and total lysates (TL) were resolved by SDS-PAGE and immunoblotted with anti-CARD11 and anti-GST. (E) GFP-SH2D3C and CARD11 co-localize upon cell spreading in response to T-cell stimulation. Jurkat cells expressing GFP-SH2D3C (green) were activated to induce spreading for 5 min at 37°C on glass slides coated with anti-CD3 and CD28 antibodies (two examples shown in two upper panels). As a control, cells were also stained on poly-lysine-coated slides (PLL) lacking anti-CD3 and anti-CD28. After fixation, cells were stained with rabbit anti-CARD11 followed by anti-rabbit IgG conjugated with Alexa-Flour 568 (red) and phalloidin conjugated with Alexa-Flour 350 (blue–actin). These results represent one of three independent experiments, which gave similar results. (F) SH2D3C activates the CARD11-mediated IL-2 activation. Jurkat E6 cells (5 × 106) were electroporated with GST-Vector (8 μg) or GST-SH2D3C (8 μg), Myc-vector (5 μg), or Myc-CARD11 (5 μg), along with two reporter plasmids (7 μg of IL-2-luc and 0.2 ng of renilla-luc). After 24 h of electroporation, cells were harvested, lysed, and examined for luciferase activity, showing a significant increase in IL-2 promoter activation upon co-transfection of both genes (student’s t-test P < 0.05). (Lower panel) Expression levels of the transfected proteins.

This Article

  1. Genome Res. 16: 1056-1072

Preprint Server