Amplification generates modular diversity at an avirulence locus in the pathogen Phytophthora

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Table 2.

Ratios of hybridization levels in avirulent and virulent strains

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Table 2.

For array-GCH, the custom-designed Phytophthora GeneChip was used. The first four array sequences listed are derived from pi3.4.

aFor each array sequence, a set of 13 oligos (25 bp) was designed and synthesized on the array.

bMismatch oligos contain 1–15 mismatching nucleotides as compared with pi3.4FA or pi3.4FV.

cPI003481 was also selected by BSA expression analysis on the Phytophthora GeneChip.

dPI000084 represents the single-copy gene Pigpa1.

eCompared with Pigpa1.

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  1. Genome Res. 16: 827-840

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