Broad-spectrum respiratory tract pathogen identification using resequencing DNA microarrays

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Figure 4.
Figure 4.

(A) REPI logic diagram. The algorithm expands subsequences to the maximum length within the constraints of the allowable no-call (N) percentage (here, 25%). Each subsequence was submitted for BLAST analysis. (B) A sample REPI output (truncated) for Lackland AFB clinical nasal wash sample #NW20031114 that unambiguously identified influenza A virus type H3N2.

This Article

  1. Published in Advance February 15, 2006, doi: 10.1101/gr.4337206 Genome Res. 16: 527-535

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