Table 2.
RVM selection of PLACE elements in glucose-regulated genes
|
Element ID |
Number of times picked by RVM |
Average weight |
Recognition sequence |
Potential target genes (from Supplemental Table S6) |
|---|---|---|---|---|
| Up-regulated | ||||
| TELOBOXATEEF1AA1 | 10 | 2.9895 | aaaccctaa | Ribosomal proteins, protein synthesis |
| AMMORESIIUDCRNIA1 | 10 | 1.3346 | ggwagggt | Nucleotide metabolism |
| QARBNEXTA | 10 | 1.1033 | aacgtgt | No significant categories |
| BS1EGCCR | 10 | 0.9637 | agcggg | Carbohydrate metabolism enzymes |
| E2FBNTRNR | 10 | 0.9067 | gcggcaaa | Protein synthesis |
| MYB26PS | 10 | 0.8397 | gttaggtt | Carbohydrate metabolism, S uptake |
| DRECRTCOREAT | 10 | 0.8076 | rccgac | Abiotic stress |
| Down-regulated | ||||
| IBOXCORENT | 10 | -3.3202 | gataagr | Trehalose synthesis |
| IBOXCORE | 10 | -2.1431 | gataa | Abiotic stress |
| IBOX | 10 | -0.7107 | gataag | |
| MYBST1 | 10 | -3.2140 | ggata | Trehalose synthesis |
| Abiotic stress | ||||
| Amino acid degradation | ||||
| LRENPCABE | 10 | -1.1698 | acgtggca | Carbohydrate, lipid and amino acid metabolism |
| GARE2OSREP1 | 10 | -0.9167 | taacgta | Secondary metabolism |
| EVENINGAT
|
10
|
-0.8441
|
aaaatatct
|
Jasmonate synthesis, abiotic stress
|
