Analysis of allelic differential expression in human white blood cells

Table 6.

Analysis of candidate imprinted genes in CEPH families



Perlegen ssIDa

CEPH pedigree number

Genotypes of parents

Genotypes of heterozygous children

Allele ratiob
Gene
Father
Mother
FLJ33071 24480254 1344 AA AG AG 0.22
Ref allele = A AG 0.22
AG 0.22
AG 0.22
1362 GG AA AG ≥10
AG ≥10
AG ≥10
AG ≥10
AG ≥10
AG ≥10
PRIM2A 38338836 1344 TA AA AT ≤0.1
Ref allele = T AT ≤0.1
AT ≤0.1
1362 TT AA AT ≤0.1
AT ≤0.1
AT ≤0.1
AT ≤0.1
AT ≤0.1
AT ≤0.1
ZNF463 24225694 1344 GG GG None None
Ref allele = A 1362 AG GG AG ≤0.1
AG ≤0.1
AG ≤0.1
AG ≤0.1





AG
≤0.1
  • a SNP identifiers used by NCBI's dbSNP for SNPs submitted by Perlegen.

  • b Ratio of reference allele frequency/alternate allele frequency.

This Article

  1. Genome Res. 16: 331-339

Preprint Server