Analysis of allelic differential expression in human white blood cells

Table 3.

Number of SNPs and genes that are differentially expressed in each individual


Individual

Heterozygous SNPs

No. of genesa,b

SNPs differentially expressedb,c

Genes differentially expressedb,c
1 495 422 125 117
2 524 430 96 92
3 478 395 111 108
4 421 368 139 133
5 498 412 128 125
6 419 359 81 80
7 504 418 110 105
8 587 480 101 94
9 591 474 108 101
10 477 400 90 86
11 569 463 119 113
12 466 391 119 109
Average
502
418
111 (22%)
105 (25%)
  • Only SNPs and genes expressed in nine or more individuals are considered.

  • a Genes containing at least one heterozygous SNP.

  • b SNPs and genes do not map 1 to 1. A small number of SNPs map to more than one gene, and many genes contain more than one SNP.

  • c Number of SNPs and genes with an allele ratio ≥1.5 in the indicated individual.

This Article

  1. Genome Res. 16: 331-339

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